5%: Consult with department researchers on advanced
experimental design and planning.
5%: Identify and integrate new, cutting-edge molecular
technologies and analysis
methods as they become useful for research purposes (e.g., de novo
genome assembly, pangenomes and comparative genomics, single
cell/nucleus RNA-seq/ATAC-seq, spatial transcriptomics, etc.).
Leverage current computational biology benchmarks to build
compelling, data-driven business cases for high-impact capital
investments and process improvements.
10%: Spearhead the preparation and presentation of research
methods across
internal reports, literature reviews, peer-reviewed manuscripts,
and professional presentations. Facilitate targeted seminars and
workshops for departmental researchers and leaders on
bioinformatics applications.
Qualifications
The ideal candidate will have advanced knowledge of next generation
sequencing technologies with demonstrated practical experience in
developing and carrying out analytical strategies in the context of
NGS applications of critical importance to microbiology and
immunology research (e.g. variant calling, genome assembly and
annotation, metagenomics, bulk and single cell RNA-sequencing,
allele-specific expression analysis, bulk and single-cell ATAC-seq,
viral discovery, etc.). The candidate will develop, maintain,
organize data structures for samples and data backups. While
candidates ideally will have experience in more than one type of
bioinformatics analysis, candidates are not expected to have
experience in all types of analyses and learning new analysis
techniques is part of the role.
Required Qualifications:
- Doctorate in the life sciences, computer science or
engineering, or related field. Candidates must have significant
bioinformatics experience.
- 3+ years of research experience in genomics, genetics,
molecular biology or computational biology.
- Hands-on experience in developing and carrying out data
analytical strategies and pipelines for analyzing datasets from
high-throughput platforms such as next generation sequencing.
- Proficiency with the Linux shell environment, a programming
language (R and/or python), plus currently used tools (e.g. BWA,
HISAT2, GATK, Seurat, etc.).
- Must be able to understand and translate life scientist
researchers' scientific goals into analytical strategies and
process requirements.
- Must be able to function as part of an interactive team while
demonstrating self-initiative to achieve the project's goals and
the group's mission.
- Ability to critically and independently think
- Excellent oral and written English communication and
interpersonal skills.
Preferred Qualifications
- Research background in microbiology and/or immunology is highly
preferred.
- Significant experience with one or more of the following types
of analysis is highly preferred: bulk and single cell
transcriptomics, variant calling, genome assembly/annotation and
epigenomics.
- Use of reproducible research methods and software version
control (e.g. git/GitHub).
- Advanced statistical, data modeling and machine learning
skills.
- Experience using high performance computing (HPC) environments
and job scheduling.
About the Department
The Department of Microbiology and Immunology (DMI) is a basic
science department in the University of Minnesota (UMN) School of
Medicine. Our faculty focus on the study of microorganism and host
interactions and engage in translational research to build and
evaluate preclinical and clinical applications of research
discoveries aimed at mitigating disease. The department seeks to
build on our rich history as we pursue transformational research.
DMI faculty have a strong focus on immunology, virology,
bacteriology, and fungal biology and they include research and
training activities encompassing studies of microbial physiology
and genetics, the immune response to infection based around a
central theme of interrogating the systems biology of infection,
immunity, and diseases.
Pay and Benefits
Pay Range: $78,000 to $84,000; depending on
education/qualifications/experience
Time Appointment: 100% Appointment
Position Type: Faculty and P&A Staff
Please visit the
Office of Human Resources website for more
information regarding benefit eligibility.
The University offers a comprehensive benefits package that
includes:
- Competitive wages, paid holidays, and generous time off
- Continuous learning opportunities through professional training
and degree-seeking programs supported by the Regents Tuition Benefit
Program
- Low-cost medical, dental, and pharmacy plans
- Healthcare and dependent care flexible spending accounts
- University HSA contributions
- Disability and employer-paid life insurance
- Employee wellbeing program
- Excellent retirement plans with employer contribution
- Public Service Loan Forgiveness (PSLF)
opportunity
- Financial counseling services
- Employee Assistance Program with eight sessions of counseling
at no cost
- Employee Transit
Pass with free or reduced rates in the Twin Cities metro
area
While our salary ranges provide a framework, it is important to
note that most of the
time, the initial pay may not reach the maximum of the range. This
approach ensures
that compensation reflects the value and unique contributions of
each candidate while
maintaining equity within our organization. As part of our
commitment to fair and
equitable compensation, please be aware that the salary offered to
incoming candidates
will be based on their individual credentials and experience.
How To Apply
Applications must be submitted online. To be considered for this
position, please click the Apply button and follow the
instructions. You will have the opportunity to complete an online
application for the position and attach a cover letter and resume
or CV.
This position will remain open until filled.
To request an accommodation during the application process, please
e-mail jobcentr@umn.edu.
Diversity
The University recognizes and values the importance of diversity
and inclusion in enriching the employment experience of its
employees and in supporting the academic mission. The University is
committed to attracting and retaining employees with varying
identities and backgrounds.
The University of Minnesota provides equal access to and
opportunity in its programs, facilities, and employment without
regard to race, color, creed, religion, national origin, gender,
age, marital status, disability, public assistance status, veteran
status, sexual orientation, gender identity, or gender expression.
To learn more about diversity at the U:
http://diversity.umn.edu
Employment Requirements
Any offer of employment is contingent upon the successful
completion of a background check. Our presumption is that
prospective employees are eligible to work here. Criminal
convictions do not automatically disqualify finalists from
employment.
About University of Minnesota
The University of Minnesota, Twin Cities (UMTC)
The University of Minnesota, Twin Cities (UMTC), is among the
largest public research universities in the country, offering
undergraduate, graduate, and professional students a multitude of
opportunities for study and research. Located at the heart of one
of the nation's most vibrant, diverse metropolitan communities,
students on the campuses in Minneapolis and St. Paul benefit from
extensive partnerships with world-renowned health centers,
international corporations, government agencies, and arts,
nonprofit, and public service organizations.
At the University of Minnesota, we are proud to be recognized by
Forbes as a Best Employer for Company Culture (2026), Best Employer
for Women (2023, 2025, 2026), and Best Employer by State
(2022-2026). In 2026, we also received Culture Excellence &
Industry Awards recognition for employee appreciation and work-life
flexibility.
